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Enrolling by Invitation

NCT Number: NCT06559176

A Study of the Safety and Efficacy of Prime Editing (PM359) in Participants With p47phox Autosomal Recessive Chronic Granulomatous Disease (CGD )

This is an open-label, single-arm, multicenter Phase 1/2 study evaluating the safety and efficacy of gene therapy by transplantation of Prime Edited autologous CD34+ stem cells modified ex vivo (PM359) in participants with autosomal recessive Chronic Granulomatous Disease (CGD) caused by mutations in the NCF1 (Neutrophil Cytosolic Factor 1) gene.

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Key information

About this study

Chronic Granulomatous Disease (CGD) is a rare genetic disease affecting the white blood cells, leading to failure of innate immunity against a variety of human pathogens and is also associated with autoimmune and inflammatory conditions. Approximately 20-25% of people with CGD inherit a mutation commonly known as "delGT" in both copies of the NCF1 gene, which encodes the p47phox protein.

This study seeks to understand the safety and efficacy of a new gene editing technology, known as Prime Editing, in participants with autosomal recessive CGD caused by the delGT mutation in NCF1. Autologous CD34+ cells are collected from the participant via mobilization and apheresis, shipped to a central manufacturing facility and modified using Prime Editing to 'correct' the delGT mutation causing p47phox CGD. After manufacture, the Prime Edited stem cells (PM359) will be shipped to the study site, where they will be infused back into the participant following a preparative procedure known as conditioning.

The study will initially enroll adult participants (aged ≥ 18) and plans to then move into adolescents aged 12 - 17, followed by children aged 6 - 11.

The study is currently enrolling a limited number of participants by invitation. Treating physicians or patients may contact [email protected] to inquire about potential participation.

Who can participate

Healthy volunteers accepted: No

Only the study team can determine whether someone qualifies for participation.

Inclusion criteria

  • Autosomal recessive Chronic Granulomatous Disease due to the delGT mutation in NCF1 causing dysfunction of p47phox
  • Treated and followed for at least the past 2 years in a specialized center
  • Willingness to participate in this study as well as a long-term follow-up study with the understanding that the total participation is 15 years
  • At least 1 prior severe CGD-related infection OR an ongoing severe CGD-related infection requiring therapy or that is refractory to standard therapy; OR an autoimmune or inflammatory condition related to CGD that is active or requiring therapy to maintain remission.

Exclusion criteria

  • For participants younger than 16 years of age: known, willing, and available 10/10 (A,B,C,DR,DQ) HLA-matched related donor (10/10 MRD)
  • Active bacteremia or fungemia
  • Ongoing inflammatory condition that is ≥ CTCAE v5.0 Grade 3 despite high-dose steroids (≥ 0.5 mg/kg/day of prednisone and/or equivalent).
  • Any contraindication which in the opinion of the transplant physician would make the participant ineligible to undergo autologous HSCT, including, but not limited to:
  • Contraindication to mobilization and apheresis, including severe allergic reaction to receipt of any medication or other drug substance required for mobilization and apheresis (e.g., G-CSF, plerixafor) or PM359 manufacture (e.g., DMSO).
  • Contraindication to receipt of the conditioning agent, busulfan.
  • Positive for presence of human immunodeficiency virus (HIV)-1 or HIV-2, or active infection with hepatitis B virus (HBV), or hepatitis C virus (HCV).
  • Inadequate organ function, including known chronic advanced end-organ damage which in the opinion of the investigator would put the participant at risk for undergoing HSCT
  • Prior or current malignancy or myeloproliferative disorder (excluding Stage 1 or lower, fully treated/excised malignant and pre-malignant disease of the skin, cervix or colon).
  • Any other condition that, in the opinion of the Investigator, may compromise the safety or compliance of the participant or would preclude the participant from successful study completion, including Participant/Parent/Guardian unable or unwilling to comply with the protocol requirements.
  • Pregnancy or breastfeeding in a postpartum female or absence of adequate contraception for fertile participants. Females of childbearing potential and non-sterile male participants who are or may become sexually active with female partners of childbearing potential are required to use highly effective contraception from Screening through at least 12 months after drug product infusion.
  • Participation in another clinical study with an investigational drug within 30 days of Screening or at least 5 times the half-life of the investigational drug (whichever is longer), or any prior receipt of gene therapy or hematopoietic stem cell transplant.

Treatment and study plan

PM359

Biological

Single dose of PM359 administered autologously by intravenous (I.V.) infusion following myeloablative conditioning with busulfan

Primary outcomes

  1. Safety of administration of PM359, as quantified by frequency of adverse events (AEs) after drug product infusion

    Time frame: PM359 infusion through Month 12 after PM359 infusion

  2. Percentage of participants with sustained reconstitution of NADPH oxidase activity in neutrophils

    Time frame: At Month 6 and Month 12 after PM359 infusion, as compared to baseline

Secondary outcomes

  1. Frequency of all drug product-related AEs, ≥ Grade 3 AEs, and serious adverse events (SAEs)

    Time frame: Signing of ICF through Month 36 following PM359 infusion

  2. Time to neutrophil engraftment

    Time frame: From PM359 infusion through engraftment, typically within 2-3 weeks but assessed up to 36 months

  3. Transplant related mortality

    Time frame: From PM359 infusion, assessed at 100 Days and 1 Year post-PM359 infusion

  4. Overall survival

    Time frame: From PM359 infusion, assessed at 1 Year and 3 Years post-PM359 infusion

  5. Incidence of acute graft-versus-host disease (GvHD)

    Time frame: From PM359 infusion through Month 36

  6. Incidence of graft failure or rejection

    Time frame: From PM359 infusion through Month 36

  7. Durability of multi-lineage hematopoietic cell reconstitution

    Time frame: Assessed at 12, 24 and 36 months following PM359 infusion

  8. Percentage of participants with clinical evidence of malignancy, pre-malignancy or myelodysplasia

    Time frame: From PM359 infusion through Month 36

  9. Percentage of participants with sustained reconstitution of NADPH oxidase activity

    Time frame: Assessed at Month 6 and Month 12 after PM359 infusion

  10. Percentage of participants with sustained reconstitution of NADPH oxidase activity

    Time frame: Assessed at Months 3, 18, 24 and 36 after PM359 infusion

  11. Reconstitution of NADPH oxidase activity in peripheral granulocytes, as measured by DHR assay

    Time frame: Months 1, 2, 3, 6, 12, 18, 24, and 36 after PM359 infusion

  12. Frequency of new or worsening severe bacterial or fungal infections requiring anti-microbial therapy, as compared to baseline

    Time frame: From Month 6 following PM359 infusion through Month 36

  13. Frequency of any new or worsening moderate or greater CGD associated infection requiring anti-microbial therapy with confirmed microbiology demonstrating bacterial or fungal origin consistent with CGD-related pathology, as compared to baseline

    Time frame: From Month 6 following PM359 infusion through Month 36

  14. Frequency of autoimmune or inflammatory, non-infectious processes consistent with CGD, with symptom severity moderate or greater, as compared to baseline

    Time frame: From 1 Year following PM359 infusion through Month 36

  15. Resolution of pre-existing active infections (defined as infection present at time of study enrollment and ongoing at time of PM359 infusion) following PM359 infusion

    Time frame: From PM359 infusion until resolution of active infection, assessed up to Month 36

  16. Resolution of pre-existing autoimmune or inflammatory (non-infectious) processes (defined as autoimmune or inflammatory processes present at time of study enrollment and ongoing at time of PM359 infusion) following PM359 infusion

    Time frame: From PM359 infusion until resolution of autoimmune or inflammatory process, assessed up to Month 36

Sponsors and collaborators

Lead sponsor

Prime Medicine, Inc.

Industry

Registry information

Official study title

A Phase 1/2 Study Evaluating Gene Therapy by Transplantation of Autologous CD34+ Stem Cells Modified Ex Vivo Using Prime Editing (PM359) in Participants With Autosomal Recessive Chronic Granulomatous Disease Due to Mutations in the NCF1 Gene

Important dates

Study start
2024
Primary completion
2030
Study completion
2030
First posted
Aug 19, 2024
Registry last updated
Apr 6, 2026

OpenTrials presents study information sourced from ClinicalTrials.gov. The official registry record should be consulted for the latest information.

View the official ClinicalTrials.gov record (opens in a new tab)

This listing is for discovery and informational purposes only. It is not medical advice, does not guarantee that a study is recruiting, and does not determine eligibility. Contact the study team and a qualified healthcare professional when considering participation.

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