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NCT Number: NCT07594860

Effect of a Probiotic or Postbiotic on Gut Microbiome During Antibiotic Treatment

This study assesses the effects of a probiotic or postbiotic on gut microbiome during antibiotic treatment.

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Key information

Age range

18 year–65 year

Sex eligibility

All sexes

Study type

Interventional

Phase

Not applicable

Primary location

About this study

The current study aims to assess the changes in microbiome composition in healthy adults receiving antibiotic treatment, and concomitantly a probiotic or postbiotic. The trial will be run in Greece, and will recruit healthy adults from the general population.

Who can participate

Healthy volunteers accepted: Yes

Only the study team can determine whether someone qualifies for participation.

Inclusion criteria

Participants meeting ALL of the following criteria will be recruited for the study:

  • Males and females aged ≥18 to ≤ 65 years; if female, either not of childbearing potential or using a medically approved method of birth control and willing to take a pregnancy test at screening.
  • Body mass index (BMI) 18.5-29.9 kg/m².
  • Healthy as determined by medical history and physical examination.
  • Agreed not to change current dietary habits during the course of the study.
  • Able to attend study visits, comply with study requirements (consumption of study medications, especially biological sample collection procedures, and study visit schedule) and provide reliable and complete data regarding AEs/SAEs and PROs.
  • Have been informed and have given written consent for the use of their data in accordance with local regulations before study inclusion.

Exclusion criteria

Participants meeting ANY of the following criteria will be excluded from the study:

  • Women who are pregnant, breastfeeding, or planning to become pregnant during the course of the study.
  • People on vegetarian or vegan diet; People on special diet (e.g. Ducan, Keto, etc.)
  • BMI ≥ 30 kg/m² or <18.5 kg/m².
  • History of intake of antibiotics, other probiotics, postbiotics, prebiotics, synbiotics, proton pump inhibitors, acid sequestrants (cholestyramine, Bile colestipol), within six months prior to the screening day.
  • Participation in other clinical trials in the last 90 days prior to screening.
  • Allergy to any penicillin antibiotic or any other beta-lactam agent (e.g. cephalosporin, carbapenem or monobactam).
  • History of jaundice/hepatic impairment due to amoxicillin/clavulanic acid.
  • Active smokers or using any form of smokeless tobacco.
  • Participants with substance abuse problems (within two years) defined as:
  • Use of recreational drugs (such as cocaine, methamphetamine, marijuana, etc.)/ Nicotine dependence.
  • High-risk drinking as defined by the consumption of four or more alcohol-containing beverages on any day or eight or more alcohol-containing beverages per week for women and five or more alcohol-containing beverages on any day or 15 or more alcohol-containing beverages per week for men.
  • Participants having clinically significant illnesses of cardiovascular, endocrine, immune, respiratory, hepato-biliary, kidney and urinary, haematological, musculoskeletal system and/or any inflammatory disorder, tumour, and other gastrointestinal diseases.
  • Participants with a history of bariatric surgery or surgical resection of the stomach, small intestine, or large intestine.
  • Participants actively using GLP1 agonist drugs (Wegovy, Semiglutide etc.) or completed treatment with said medication less than 12 weeks before screening.
  • Any condition that could, in the opinion of the Investigator, preclude the participant's ability to successfully and safely complete the study or that may confound study outcomes.

Treatment and study plan

Probiotic

Dietary Supplement

Participants in this arm will receive a daily dose of of a probiotic (live bacterium), in a form of 2 capsules once daily, for 28 days.

Postbiotic

Dietary Supplement

Participants in this arm will receive a daily dose of a postbiotic (heat-inactivated bacterium), in a form of 2 capsules once daily, for 28 days.

Placebo

Dietary Supplement

Participants in this arm will receive an equivalent placebo for the duration of the study (28 days).

Primary outcomes

  1. Changes in gut microbiome composition between baseline and day 14 as compared to placebo.

    Time frame: Day 0 and Day 14

    To assess the effects of a probiotic or postbiotic in gut microbiome composition of healthy adults receiving antibiotic therapy, as measured by changes in alpha and beta diversity of the gut microbiome as compared to placebo.

Secondary outcomes

  1. Changes in gut microbiome composition throughout the study as compared to placebo and baseline.

    Time frame: Day 0, Day 3, Day 7, Day 28, and Day 56

    Changes in microbiome composition as measured by changes in alpha and beta diversity of the gut microbiome throughout the study as compared to placebo and baseline.

  2. Changes in abundance of beneficial versus opportunistic/ pathogenic bacterial species throughout the study as compared to baseline and to placebo

    Time frame: Day 0, Day 3, Day 7, Day 14, Day 28, and Day 56

    Effects of a probiotic or postbiotic on the abundance of beneficial versus opportunistic/pathogenic bacterial species throughout the study as compared to baseline and to placebo.

  3. Changes in the abundances of microbial genes contained in specific functional modules through the study as compared to baseline and placebo.

    Time frame: Day 0, Day 7, Day 14, Day 28, and Day 56

    Effects of probiotic or postbiotic on the abundances of genes contained in specific functional modules obtained from KEGG database. A Gene Set Enrichment Analysis (GSEA) is performed to obtain which modules are enriched by the biotics effect thought the study. Significant associations will be reported with the Normalized Enrichment score (NES) and adj.p.value.

  4. Study the associations of specific microbe abundances with the development of gastrointestinal (GI) symptoms

    Time frame: Day 0, Day 3, Day 7, and Day 14

    Association between each bacterial abundance and the clinical measures, related to GI symptoms, will be performed using linear models. Significant associations will be reported with the linear model coefficient and adj.p.value.

  5. .Changes in the abundances of microbial virulence factors and antibiotic resistant genes through the study as compared to baseline and placebo.

    Time frame: Day 0, Day 7, Day 14, Day 28, and Day 56

    Effects of probiotic or postbiotic on the abundances of genes annotated as virulence factors or antibiotic resistant genes through the study as compared to baseline and placebo. The results will be tested using the most fitting statistical method, and p.value will be reported.

  6. Safety profile throughout the study as compared to placebo.

    Time frame: 56 days

    The number of adverse events (AE)/serious adverse events (SAE) related to the study investigational product occurring during the study compared to placebo.

  7. Tolerability of a probiotic or postbiotic as measured by a validated questionnaire and compared to placebo.

    Time frame: Day 0, Day 7, Day 14, Day 28, and Day 56

    Assess tolerability of a probiotic or postbiotic consumption as measured by a validated questionnaire, the Gastrointestinal Symptom Rating Scale (GSRS) throughout the study and compared to baseline and placebo.

Other outcomes

  1. Effects on development of antibiotic-associated diarrhea (AAD) as compared to placebo.

    Time frame: 56 days

    Efficacy of probiotic or postbiotic on incidence of diarrhea or AAD during and after antibiotic therapy as assessed by frequency and form of daily bowel movements measured with Bristol Stool Form Scale (BSFS). BSFS scale ranges from 1 to 7 with scores 1-2 indicating hard and lumpy bowel motions and 6-7 indicating runny, watery stools.

  2. Effects on duration of diarrhea or AAD if presented during the study as compared to placebo.

    Time frame: 56 days

    Efficacy of probiotic or postbiotic on the duration of diarrhea or AAD, if present, as assessed by Bristol Stool Form Scale (BSFS). BSFS scale ranges from 1 to 7 with scores 1-2 indicating hard and lumpy bowel motions and 6-7 indicating runny, watery stools.

Study contacts

Contact information is provided by the study sponsor or research team.

ADM Medical Team

CONTACT

[email protected]

+441460243230

Sponsors and collaborators

Lead sponsor

The Archer-Daniels-Midland Company

Industry

Collaborators

  • NEXT CRO

Registry information

Official study title

Assessment Of Gut Microbiome Changes During Antibiotic Treatment With Probiotic, Postbiotic Or Placebo: A Randomized, Triple-blind, Placebo-controlled Pilot Study.

Acronym: POTATO-2

Important dates

Study start
2026
Primary completion
2027
Study completion
2027
First posted
May 19, 2026
Registry last updated
May 19, 2026

OpenTrials presents study information sourced from ClinicalTrials.gov. The official registry record should be consulted for the latest information.

View the official ClinicalTrials.gov record (opens in a new tab)

This listing is for discovery and informational purposes only. It is not medical advice, does not guarantee that a study is recruiting, and does not determine eligibility. Contact the study team and a qualified healthcare professional when considering participation.

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