Skip to main content
OpenTrials
Recruiting

NCT Number: NCT06694363

New Biomarker-based Strategy to Screen and Monitor for Activated Phosphoinositide 3-kinase δ Syndrome

The study would like to compare patient samples at different time points using state-of the art-phenotyping tools.

Collection of blood samples of APDS patients undergoing PI3K inhibitor treatment will be collected when feasible according to the standard of care planning (a blood test is supposed to be performed for these patients at M0-M3-M6-M12 then each 6 months for a total period of 2 years from the beginning of the PI3K inhibitor treatment).

The whole blood will be processed in order to isolate the peripheral blood mononuclear cells (PBMC) and the plasma. Serum, RNA and DNA extraction will be performed on a separate sample.

Recruiting

Interested in participating?

Request Info

Key information

Age range

12 year and older

Sex eligibility

All sexes

Study type

Observational

Primary location

Hôpital Haut Levêque - BORDEAUX, Bordeaux, France

Loading trial locations.

About this study

Activated PI3K delta syndromes (PI3Kδ) (APDS type 1 and type 2) are combined immunodeficiencies with variable clinical manifestations caused by heterozygous gain-of-function mutations of the PIK3CD gene. APDS is a very young onset disease, most clinical manifestations appear in pediatric age. Patients may experience severe, disabling, and life-threatening clinical manifestations. Additionally, they may exhibit autoimmunity in addition to immune deficiency. APDS patients present a high risk of developing tumors especially B lymphomas. Hematopoietic stem cell transplantation (HSCT) is the only curative option and, given the risks, may be considered for patients with severe APDS (including those who have developed lymphoma). HSCT is curative, but carries a 10 to 20% mortality risk and cannot guarantee reversibility of organ damage. Positive data from the phase II/III study of the PI3Kδ selective inhibitor leniolisib met the co-primary criteria of reduced lymph node size and increased percentage of B naïve cells in patients with APDS. In addition, safety data from the study showed that leniolisib was well tolerated by participants. The drug is also under review by the European Medicines Agency and a marketing authorization for APDS patients older than 12 years old will be soon available. In the meantime the access to this drug is available by compassionate use for patients older than 12 years old.

In this context, it will be interesting to evaluate the clinical and biological profile of these patients before and after leniolisib treatment in order to identify useful biomarkers for the follow up of the disease. In addition, carful long-term monitoring of patients under PI3Kδ inhibitors is mandatory to detect adverse effects of iatrogenic overinhibition of the PI3K pathway.

Who can participate

Healthy volunteers accepted: No

Only the study team can determine whether someone qualifies for participation.

Inclusion criteria

Group 1:

  • Patients with genetic diagnosis of APDS type 1 or type 2 and planned to be treated by PI3Kδ selective inhibitor leniolisib
  • Primary immunodeficient patients with new disease-causing variants in the PIK3CD gene or PIK3R1 gene
  • Minimum age 12 years old
  • Patients or holders of parental authority do not oppose participation in this research.
  • Patients affiliated to a Health Insurance scheme or beneficiaries

Group 2 :

  • Patients with genetic diagnosis of APDS type 1 or type 2 already treated by PI3Kδ selective inhibitor leniolisib in the last 2 years
  • Patients whose pre-treatment samples are available/analyzable
  • Minimum age 12 years old
  • Patients or holders of parental authority do not oppose participation in this research.
  • patients affiliated to a Health Insurance scheme or beneficiaries

Exclusion criteria

  • Bone marrow transplantation
  • Refusal to participate to the study.

Treatment and study plan

blood samples

Biological

A maximum of 27 ml of blood collected at each visit for metabolic markers analysis

Urine samples

Biological

One urine sample collected at each visit for enteric virus infection research

Stool samples

Biological

One stool sample collected at each visit for enteric virus infection research

Primary outcomes

  1. Biomarker

    Time frame: At 0 day, 3 months, 6 months, 12 months, 18 months and 24 months of treatment

    Identify new biomarker marker for increased PI3K signaling to monitor the disease severity by mass cytometry, single cell RNA-sequencing, single cell ATAC-sequencing and screening for auto-antibodies

Secondary outcomes

  1. activation-induced cytidine deaminase (AID) off-target activity

    Time frame: At 0 day, 3 months, 6 months, 12 months, 18 months and 24 months of treatment

    Investigate the possibility of activation-induced cytidine deaminase (AID) off-target activity in memory B cells due to PI3Kdelta inhibitor treatment by NGS panel sequencing

  2. Correlation between biological data with the clinical data

    Time frame: At 0 day, 3 months, 6 months, 12 months, 18 months and 24 months of treatment

    the analyses results will be correlated with the clinical data collected for the patients enrolled in the trial and receiving PIK3CD inhibitor treatment (early access program) in order to explore a possible correlation between biological data and clinical characteristics.

  3. Enteric virus infection research

    Time frame: At 0 day, 3 months, 6 months, 12 months, 18 months and 24 months of treatment

    Presence of Chronic enteric virus infection will be investigated by multiplex PCR and if negative by NGS in stools, plasma, urins

Study contacts

Contact information is provided by the study sponsor or research team.

Laure CHOUPEAUX, MSc

CONTACT

[email protected]

01 44 38 17 11 ext. +33

Michaela SEMERARO, MD, PhD

CONTACT

[email protected]

01 42 19 27 16 ext. +33

Sponsors and collaborators

Lead sponsor

Assistance Publique - Hôpitaux de Paris

Other

Collaborators

  • URC-CIC Paris Descartes Necker Cochin

Registry information

Acronym: BIO-APDS

Important dates

Study start
2025
Primary completion
2029
Study completion
2029
First posted
Nov 19, 2024
Registry last updated
Mar 23, 2026

OpenTrials presents study information sourced from ClinicalTrials.gov. The official registry record should be consulted for the latest information.

View the official ClinicalTrials.gov record (opens in a new tab)

This listing is for discovery and informational purposes only. It is not medical advice, does not guarantee that a study is recruiting, and does not determine eligibility. Contact the study team and a qualified healthcare professional when considering participation.

Published trials that share one or more normalized conditions with this study.