Kyung Hee University Hospital
Seoul, 02447, South Korea
Location status: Recruiting
NCT Number: NCT06183697
The goal of this prospective, observational study is to collect health-related data including microbiome, blood samples, and dietary habits from the oral and gastrointestinal tracts in healthy subjects. In addition, the study aims to perform microbiome and multi-omics analysis on the collected samples and build an integrated database of the data.
Interested in participating?
Request Info13 year–85 year
All sexes
Observational
Seoul, 02447, South Korea
Location status: Recruiting
Healthy volunteers accepted: Yes
Only the study team can determine whether someone qualifies for participation.
Inclusion criteria
Exclusion criteria
Time frame: 5 years
Analysis of the microbial community composition will be performed using 16s rRNA gene amplicon sequencing. The relative abundance of microbial species at the genus or family level will be assessed.
Time frame: 5 years
Alpha diversity will be measured using Shannon diversity index to combine ASV richness and abundance into a single evenness value
Time frame: 5 years
Alpha diversity will be measured using Fisher's index, which calculates the relationship between abundance and number
Time frame: 5 years
Alpha diversity will be measured using Faith's phylogenetic diversity whole tree, representing the sum of all branch lengths as a measure of phylogeny and diversity.
Time frame: 5 years
Analysis of bacterial mRNA profiles will be performed through read mapping using NCBI RefSeq database, quantification of gene and transcript & bacterial taxonomic profiling using HUMAnN and MetaPhlAn pipeline, transcript quantification and identification of differentially expressed gene using SALMON and human reference genome fastq file.
Time frame: 5 years
Analysis of metabolites will be performed by matching metabolite ID achieved from LC/MS with Human Metabolome Database (HMDB) for metabolite identification. Analysis on the difference of metabolite between groups will be performed by PCA or PLS-DA using MZmine3, OpenChrome or Metaboanalyst v5.0.
Time frame: 5 years
Analysis of total virus profiles will be performed by comparing viral protein sequence with NCBI refseq viral database and taxonomy annotation.
Time frame: 5 years
Bacterial strains that exhibit differential abundance between healthy individuals and patients will be inoculated, isolated, and identified.
Contact information is provided by the study sponsor or research team.
Kyunghee University Medical Center
Other
Clinical Study for Multi-omics Database Construction of a Cohort of Healthy Korean Volunteers for Integrative Microbiome Analysis
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View the official ClinicalTrials.gov record (opens in a new tab)This listing is for discovery and informational purposes only. It is not medical advice, does not guarantee that a study is recruiting, and does not determine eligibility. Contact the study team and a qualified healthcare professional when considering participation.
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