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NCT Number: NCT07566754

MOTIF@FRESH: Modifying Organisms Transvaginally in Females @ FRESH

The MOTIF@ FRESH trial will assess the safety and efficacy of "vaginal microbiome transplantation" (VMT). Healthy females will be enrolled to donate vaginal fluid which will be processed and transplanted in females with a history of recurrent bacterial vaginosis (BV), treated with antibiotics.

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Key information

Age range

18 year–25 year

Sex eligibility

Female

Study type

Interventional

Phase

Phase 2

Primary location

FRESH Clinic

Durban, South Africa

Location contact

Funidiswe Chonco, MD

SUB_INVESTIGATOR

Rosie Mngqbisa, MBChB, MPH

PRINCIPAL_INVESTIGATOR

Siphesihle R Ngcobo, MD

SUB_INVESTIGATOR

Sooseela V Pillay

CONTACT

[email protected]

+27 31- 9060394

Thembelihle Dlamini

CONTACT

[email protected]

+27 73 318 9320

Thumbi Ndung'u, PhD

PRINCIPAL_INVESTIGATOR

About this study

The proposed randomized, double-blinded, placebo-controlled trial is to evaluate the safety of vaginal microbiota transplantation (VMT) in women with recurrent bacterial vaginosis (BV). The study is based in South Africa, at the FRESH (Females Rising through Education, Support, and Health) Clinical Research Site (CRS) located in the Umlazi Township of Durban. The aim of the trial is to assess the ability of antibiotic treatment plus VMT to establish a Lactobacillus-dominant vaginal community. The underlying hypothesis is that the VMT will lead to less inflammation and higher prevalence of vaginal Lactobacillus compared to antibiotics alone. The transplant material will be vaginal fluid collected from healthy donors (also known as Donors) using a disposable menstrual cup.

Donors are defined as participants with Nugent scores <4. Over a 16-week period, donors will provide vaginal fluid via softcups (referred to as "donations"). All donations will undergo extensive testing for sexually transmitted infections (STIs) and other infections. Donations that test negative for specified infections will be processed to generate vaginal microbial transplantation (VMT) doses for recipients.

Recipients are defined as participants with Nugent scores ≥4. Because the HPV vaccine is not routinely administered in South Africa, all recipients without documented proof of prior HPV vaccination will receive the HPV vaccine at least 30 days prior to the intervention. The intervention includes the standard of care for bacterial vaginosis in both the U.S. and South Africa: oral metronidazole (MTZ), administered twice daily for seven days. Following completion of the MTZ course, recipients will receive three VMT doses administered over approximately 1.5 weeks. Recipients will be randomized in a 2:1 ratio to receive either VMT or placebo and will be followed for six months post-intervention.

Who can participate

Healthy volunteers accepted: No

Only the study team can determine whether someone qualifies for participation.

Inclusion criteria

  • Premenopausal females between 18 to 25 years of age who are enrolled in the FRESH study
  • Nugent score ≥ 4
  • Confirmation of use of effective contraceptive method by all study recipient participants (referred to as recipients) of child-bearing potential, which includes use of at least one of the following: Hormonal method, such as birth control pills, patches, injections, vaginal rings, or implants; Barrier method, such as a condom or diaphragm used with a spermicide (a foam, cream, or gel that kills sperm); Intrauterine device (IUD) - non-levonorgestrel containing
  • Ability and willingness to give written informed consent.

Exclusion criteria

  • History of clinically significant vaginal, cervical, or uterine disease including but not limited to cancer of the female reproductive tract, prior hysterectomy, high grade cervical dysplasia (CIN III), or diagnosed with cervicovaginal infection (with the exception of bacterial vaginosis or yeast) within the 30 days prior to the procedure
  • Allergy to metronidazole
  • Use of investigational therapies or investigational vaccines within 90 days prior to study screening
  • Has not received the HPV vaccine and is not willing to be vaccinated
  • Metabolic syndrome, e.g. diabetes, pre-diabetes, glucose intolerance
  • Use of any immunomodulatory agents within 30 days prior to study enrollment
  • Participants taking any of the following medications: systemic steroids (inhaled or nasal steroid therapy is permitted), interleukins, systemic interferons, or systemic chemotherapy
  • History of coronary artery disease, myocardial infarction, COPD, chronic renal failure, decompensated cirrhosis, or any other condition that in the opinion of the investigator will compromise ability to participate in the study
  • Pap smear result of LSIL, HSIL, AGUS
  • Insertion of levonorgestrel-containing IUD within 90 days prior to study enrollment
  • Either breastfeeding, pregnant, or trying to conceive within 24 weeks prior to study enrollment; or becomes pregnant during study period
  • Use of probiotics and prebiotics (supplements and products, oral or vaginal) within 30 days of the study
  • NOTE: Oral yogurt with live cultures and fermented foods are allowed.
  • Routine use of oral antibiotics i.e., daily use for acne, Hiradenitis suppurativa, or regular use for post-coital urinary tract infection prophylaxis within the past 30 days
  • Taken non-metronidazole antibiotics in last 30 days
  • Taken metronidazole within the last 2 weeks
  • BMI > 40
  • Positive for any of the STIs listed below or on treatment for any of them.
  • Neisseria gonorrhoeae
  • Chlamydia trachomatis
  • HIV
  • Trichomonas vaginalis
  • Syphilis
  • Mycoplasma genitalium
  • Currently employed at, or professionally affiliated with the FRESH clinical research site, UKZN's HIV Pathogenesis Program (HPP), or the Ragon Institute of Mass General Brigham, MIT and Harvard (referred to as "the Ragon/MGH" in this document).
  • Screens positive for TB by symptomatic questionnaire

Treatment and study plan

Vaginal Microbiome Transplantation (VMT)

Biological

Vaginal fluid from healthy donors

oral metronidazole

Drug

Metronidazole 400 mg PO every 12 hours for 7 days is the concomitant medication. This antibiotic course is the standard Bacterial Vaginosis (BV) treatment which effectively eliminates microbes associated with BV for a limited time.

Sterile saline solution

Other

1mL of sterile saline solution

Primary outcomes

  1. Evaluate the safety of VMT

    Time frame: for 23 weeks after intervention

    The primary outcome of the study is to evaluate if VMT increases the proportion of women with a Lactobacillus crispatus-dominant microbiota at any time within the 4 weeks after the first dose as measured by sequencing of the microbial community where Lactobacillus crispatus make up > 50% of detected microbes.

Secondary outcomes

  1. Determine whether VMT will result in a durable change in vaginal microbiota

    Time frame: 2, 12, and 24 weeks after intervention

    Secondary outcome will measure Lactobacillus crispatus dominance across follow-up weeks. The hypothesis is that antibiotic plus VMT therapy will increase the proportion of women with a Lactobacillus crispatus-dominant microbiota from 5-10% to 50-60%. The safety, toxicity, and tolerability of VMT will also be assessed via a) follow up pelvic assessments to assess for rash, irritation or infection calls, b) patient symptom questionnaires to assess self-reported symptoms of vulvovaginal discomfort, and c) adverse event reporting.

  2. Characterize the host clinical and subclinical mucosal inflammatory response before and after VMT

    Time frame: 24 weeks after intervention

    Additional secondary, exploratory analyses will be done to evaluate mechanisms for increased Lactobacillus prevalence, or lack thereof. This will include measuring proportions of individual Lactobacillus species (e.g., L. crispatus, L. iners, L. jensenii, L. gasseri), assessing vaginal microbial community type, microbial community diversity measures, individual taxa associated with treatment group, and host mucosal inflammatory immune response. (e.g., vaginal concentration of IL1beta, IL1alpha, IL1RA, IL6, IL8, TNFa, IFNg)

Study contacts

Contact information is provided by the study sponsor or research team.

Eyerusalem T Alemu, BA

CONTACT

[email protected]

619-522-4661

Sarah M Eisa, MPH

CONTACT

[email protected]

551-689-4016

Sponsors and collaborators

Lead sponsor

Douglas Kwon

Other

Collaborators

  • Bill and Melinda Gates Foundation
  • Massachusetts General Hospital

Registry information

Acronym: MOTIF@FRESH

Important dates

Study start
2026
Primary completion
2027
Study completion
2028
First posted
May 5, 2026
Registry last updated
May 18, 2026

OpenTrials presents study information sourced from ClinicalTrials.gov. The official registry record should be consulted for the latest information.

View the official ClinicalTrials.gov record (opens in a new tab)

This listing is for discovery and informational purposes only. It is not medical advice, does not guarantee that a study is recruiting, and does not determine eligibility. Contact the study team and a qualified healthcare professional when considering participation.

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