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NCT Number: NCT07169396

Identifying Genetic Targets in Gynecological Tumors

This observational study aims to identfy genetic targets involved in the pathogenesis of gynecological tumors, with a focus on high-grade serous ovarian carcinoma. Using a triple approach - in silico, ex vivo and in vitro - the study will investigate the role of gonadotropins and their related signaling pathways in the epithelial ovarian cancers. Gene and protein expression levels will be evaluated through transcriptomic analysis, immunohistochemistry and functional assays on tumor cell lines. The goal is to uncover potential diagnostic or therapeutic targets in gynecological malignancies.

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Key information

Age range

18 year and older

Sex eligibility

Female

Study type

Observational

Primary location

Azienda USL IRCCS di Reggio Emilia

Reggio Emilia, Italy

Location status: Recruiting

Location contact

Jasmine Lonetti

CONTACT

[email protected]

About this study

Ovarian cancer is the leading cause of death among gynecological malignanciens. High-grade serous ovarian carcinoma (HGSOC) represents the most common and aggressive subtype. Growing evidence suggests that gonadotropins and their receptors (FSHR and LHCGR), as well as membrane estrogen receptors (GPER), may play a significant role in ovarian carcinogenesis by modulating proliferative and anti-apoptotic signals. The GEN EX CO 2021 study is a monocentric, observational project conducted at AUSL-IRCCS Reggio Emilia. It is both prospective and retrospective, and it aims to identify gene expression patterns that differentiate ovarian tumor tissues from normal ovarian epithelium. The study uses a triple experimental approach:

  • In silico: differentially expressed genes were identified from public datasets (GSE18521 and GSE26712) via transcriptomic analysis and pathway analysis;
  • Ex vivo: mRNA and protein expression will be assessed in fresh-frozen and FFPE tissue samples from patients with HGSOC and other rare epithelial ovarian tumor subtypes (e.g., mesonephric-like, mucinous, endometrioid, clear cell);
  • In vitro: functional experiments using ovarian cancer cell lines (e.g., A2780, KGN, HGL5) will evaluate the effects of gene overexpression or silencing on cell viability, apoptosis and proliferation.

Participants include both prospective cases and retrospective samples, as well as control tissues from patients undergoing surgery for benign conditions. Gene expressions will be assessed through digital PCR, while protein levels will be analyzed via immunohistochemistry. Functional studies will explore the biological impact of selected genes on tumor cell behavior. Data will be collected using a secure, coded e-CRF in compliance with ethical and privacy regulations. The ultimate goal is to identify novel molecular targets that could inform future diagnostic or therapeutic approaches in ovarian cancer.

Who can participate

Healthy volunteers accepted: No

Only the study team can determine whether someone qualifies for participation.

Inclusion criteria

  • Adult women ≥18 years old
  • Histologically confirmed diagnosis of epithelial ovarian cancer (including high- grade serous, endometrioid, mucinous, clear cell, or mesonephric-like histotypes)
  • Signed informed consent (for prospective cases) or ethically approved waiver (for retrospective samples)

Exclusion criteria

  • Refusal to sign informed consent
  • Diagnosis of low-grade or non-epithelial ovarian tumors
  • Patients whose clinical or pathological data are unavailable or insufficient for study inclusion

Treatment and study plan

RNA extraction and gene expression

Other

RNA extraction and gene expression

Primary outcomes

  1. Gene expression profiling of selected target genes

    Time frame: 18 months

    Quantification of gene expression levels (e.g., PRKAR1A, GNAS, GNAQ, ERBB2, GPM6B, etc.) in ovarian tumor tissue vs normal ovarian epithelium using digital PCR.

Secondary outcomes

  1. Protein expression analysis by immunohistochemistry

    Time frame: 24 months

    evaluation of protein levels of selected genes in ovarian tumor and control tissues.

  2. Functional in vitro validation

    Time frame: 30 months

    assessment of cellular response to gene modulation (overexpression / silencing) in ovarian tumor cell lines.

  3. Transcriptome-wide analysis in recurrent cases

    Time frame: 30 months

    extended differential gene expression and pathway analysis in samples from patients with tumor recurrence.

Study contacts

Contact information is provided by the study sponsor or research team.

Beatrice Melli, MD

CONTACT

[email protected]

0522-29577

Sponsors and collaborators

Lead sponsor

Azienda USL Reggio Emilia - IRCCS

Other Gov

Registry information

Official study title

Identification of Genetic Targets in Gynecological Tumors Via a Triple in Silico Ex-vivo / in Vivo Approach

Acronym: GEN_EXP_CO2021

Important dates

Study start
2021
Primary completion
2021
Study completion
2027
First posted
Sep 11, 2025
Registry last updated
Jul 24, 2026

OpenTrials presents study information sourced from ClinicalTrials.gov. The official registry record should be consulted for the latest information.

View the official ClinicalTrials.gov record (opens in a new tab)

This listing is for discovery and informational purposes only. It is not medical advice, does not guarantee that a study is recruiting, and does not determine eligibility. Contact the study team and a qualified healthcare professional when considering participation.

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