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NCT Number: NCT04997733

Fecal Microbiota Transplantation in Crohn's Disease as Relay After Anti-TNF Withdrawal

Crohn's disease (CD) is a chronic inflammatory bowel disease. CD pathogenesis remains poorly understood but involves an inappropriate immune response toward an unbalanced gut microbiota in predisposed hosts.

The purpose of this study is to evaluate de clinical efficacy of the fecal microbiota transplantation (FMT) as a maintenance treatment following anti-TNF agent withdrawal in CD's patient.

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Key information

Age range

18 year–74 year

Sex eligibility

All sexes

Study type

Interventional

Phase

Phase 3

Primary location

About this study

Crohn's disease (CD) is a chronic inflammatory bowel disease affecting approximately 120000 patients in France, mostly at young age, and altering their quality of life.

Immunosuppressive treatments in CD are expensive and associated with potentially severe complications.

Alternative treatment strategies are thus required. This is particularly the case for CD patients in remission under anti-TNF agents for which no specific recommendation are available.

CD pathogenesis remains poorly understood but involves an inappropriate immune response toward an unbalanced gut microbiota in predisposed hosts.

Fecal microbiota transplantation (FMT) is currently recommended for treating recurrent Clostridium difficile infection. Although the pathogenesis involved in CD differs, FMT is a potential therapeutic strategy that could restore the appropriate host-microbiota crosstalk by transferring a healthy microbiota in a CD patient. However, as the gut microbiota is dramatically altered by intestinal inflammation, transferring a massive amount of microbes in an inflamed gut with epithelial barrier disruption might be a suboptimal strategy and could even have detrimental effects by allowing bacterial translocation.

Results of randomized controlled trial (RCT) in CD are lacking to date. We performed a pilot RCT (NCT02097797), evaluating the impact of a single FMT in 18 CD patients who achieved remission by corticosteroid treatment. A higher rate of steroid free clinical remission was observed in the FMT arm at 24 weeks (57.1% vs 33.3% in FMT and control arm respectively). CD Endoscopic Index of Severity was also improved at 6 weeks in FMT (median 8.5 vs 3.5 p=0.03) but not in sham group (median 2.4 vs 2.7 p=0.8). Moreover, the only 2 patients who early relapsed in the FMT group were those who did not show any engraftment of donor microbiota at week 6. These promising data, currently submitted for publication, suggest that using FMT as a maintenance treatment in CD can be effective. However, these promising findings need to be confirmed by a Phase III RCT.

Who can participate

Healthy volunteers accepted: Yes

Only the study team can determine whether someone qualifies for participation.

Inclusion criteria

for patients :

  • Age ≥ 18 years and < 75 years
  • Crohn's disease (according to the Lennard-Jones criteria) for at least 6 months
  • Patient in steroid-free clinical remission for at least 6 months under anti-TNF agent (no clinical evidence of flare nor change in Crohn's disease specific treatment (anti-TNF, immunosuppressive, …) within 6 months before inclusion) and CDAI <150 the week before inclusion) and willing to withdraw anti-TNF treatment
  • Female of child-bearing age with an active contraception and this during at least the period of treatment (week 52)
  • Patient with health insurance
  • Informed Written consent

Inclusion criteria

for healthy volunteer donor :

  • Age ≥ 18 years and < 50 years
  • 17 kg/m² < body mass index < 30 kg/m²
  • Regular bowel movement defined as at least 1 stool every other day and maximum 2 stools per day
  • Subject with health insurance (AME excepted)
  • Informed written consent

Exclusion criteria

for patients :

  • Crohn's Disease complication requiring surgical treatment
  • Contraindication to colonoscopy or anesthesia
  • Pregnancy or breastfeeding during the study (Cf. Addendum 4)
  • Diagnosis of Crohn's disease restricted to the upper gastrointestinal tract (oesophagus, stomach, duodenum, jejunum)
  • Patient with active perineal disease (defined as evidence of perineal abscess or active draining fistula or presence of seton or presence of perineal ulceration)
  • History of more than one small bowel resection or small intestine resection > 1 meter
  • Current stoma (Ileostomy or a colostomy) or stoma in the last 6 months or any other intra-abdominal surgery within 3 months prior to inclusion
  • Participation in any other interventional study
  • Patient under legal protection

Exclusion criteria

for healthy volunteer donor :

  • For details, please see protocol

Treatment and study plan

Fecal microbiota transplantation (FMT)

Drug

The colonoscopy for FMT will be planned between 7 and 14 days after the last adalimumab or sub-cutaneous infliximab administration and 6 weeks +/- 7 days after the last intravenous infliximab administration 14 and 28 days following the last sub-cutaneous golimumab administration. After colon cleansing using polyethylene glycol, the patient will have a colonoscopy under general anesthesia. The patient will then receive either FMT (frozen preparation of 50g of stools in 300ml of saline (NaCl 0.9%), (FMT vehicle in the terminal ileum or the colon.

At W12 and W24 after first colonoscopy, the patient receives treatment by capsule (15 capsules contain 0.8g of stools by visit).

Sham-transplantation (placebo)

Drug

The colonoscopy for sham-transplantation will be planned between 7 and 14 days after the last adalimumab or sub-cutaneous infliximab administration and 6 weeks +/- 7 days after the last intravenous infliximab administration, 14 and 28 days following the last sub-cutaneous golimumab administration. After colon cleansing using polyethylene glycol, the patient will have a colonoscopy under general anesthesia. The patient will then receive either sham transplantation (frozen preparation of NaCl 0.9% with 10% glycerol) in the terminal ileum or the colon.

At S12 and S24 after first colonoscopy, the patient receives treatment by capsule (15 capsules contain placebo).

Primary outcomes

  1. Evaluate the clinical efficacy of FMT versus sham transplantation as a maintenance treatment following anti-TNF agent withdrawal in patients with Crohn's disease in steroid-free clinical remission for at least 6 months under anti-TNF agent

    Time frame: 52 weeks after FMT or sham-transplantation

    Clinical remission (defined by a Crohn's disease activity index (CDAI) <150) at week 52 (V8) without any flare between week 0 (colonoscopy (V2)) and week 52 (V8). Flare is defined by a CDAI (Addendum 2) above 250 or between 150 points and 250 points with a 70-point increase from baseline over 2 consecutive weeks and the need

Secondary outcomes

  1. Relapse free survival

    Time frame: 52 weeks after FMT or sham-transplantation

    Relapse free survival rate from week 0 (V2) to week 52 (V8)

Other outcomes

  1. Mucosal healing

    Time frame: 52 weeks after FMT or sham-transplantation

    Proportion of endoscopic remission (SES-CD ≤2) at week 52 (V8) and change (in %) in endoscopic score (SES-CD) between week 0 (V2) and 52 (V8)

  2. Clinical remission

    Time frame: 52 weeks after FMT or sham-transplantation

    Clinical remission defined by a CDAI < 150 at week 52

  3. Endoscopic remission

    Time frame: 52 weeks after FMT or sham-transplantation

    Endoscopic remission defined by a SES-CD ≤ 2 at week 52

  4. Changes in inflammation 1

    Time frame: 6, 12, 24, 36, 48 and 52 weeks after TMF or sham-transplantation

    Measures of inflammation: blood cell count

  5. Changes in inflammation 2

    Time frame: 6, 12, 24, 36, 48 and 52 weeks after TMF or sham-transplantation

    Measures of inflammation: C reactive protein (CRP) level

  6. Changes in inflammation 3

    Time frame: 6, 12, 24, 36, 48 and 52 weeks after TMF or sham-transplantation

    Measures of inflammation: fecal calprotectin

  7. Changes in intestinal microbiota composition

    Time frame: 6, 12, 24, 36, 48 and 52 weeks after TMF or sham-transplantation

    Microbiota composition and diversity using 16s sequencing technology

Study contacts

Contact information is provided by the study sponsor or research team.

Harry SOKOL, PU-PH

CONTACT

[email protected]

01 49 28 31 62

Laurent BEAUGERIE, PU-PH

CONTACT

[email protected]

[email protected]

Sponsors and collaborators

Lead sponsor

Assistance Publique - Hôpitaux de Paris

Other

Collaborators

  • CRB-HUEP
  • Institut National de la Santé Et de la Recherche Médicale, France

Registry information

Acronym: MIRACLE

Important dates

Study start
2021
Primary completion
2027
Study completion
2029
First posted
Aug 10, 2021
Registry last updated
Aug 11, 2025

OpenTrials presents study information sourced from ClinicalTrials.gov. The official registry record should be consulted for the latest information.

View the official ClinicalTrials.gov record (opens in a new tab)

This listing is for discovery and informational purposes only. It is not medical advice, does not guarantee that a study is recruiting, and does not determine eligibility. Contact the study team and a qualified healthcare professional when considering participation.

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