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NCT Number: NCT07555405

Evaluating the Safety and Efficacy of Decitabine in the Treatment of XMEN Patients

This is a single-arm, open-label, single-center, exploratory clinical trial evaluating the safety and efficacy of decitabine in male patients aged 1 month to 18 years with X-linked magnesium transporter 1 (MAGT1) deficiency. Eligible patients have a confirmed MAGT1 gene mutation leading to XMEN disease ( X-linked MAGT1 deficiency with increased susceptibility to Epstein-Barr virus (EBV) infection and N-linked glycosylation defect). The study will assess changes in liver function, immune function, and NKG2D expression, as well as adverse events, over four treatment cycles and the follow-up period.

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Key information

Conditions

Age range

1 month–18 year

Sex eligibility

Male

Study type

Interventional

Phase

Phase 4

Primary location

About this study

XMEN disease is a rare X-linked primary immunodeficiency caused by loss-of-function mutations in MAGT1, leading to chronic Epstein-Barr virus (EBV) infection, liver dysfunction, and reduced NKG2D expression on lymphocytes. TUSC3 shares functional redundancy with MAGT1 but is epigenetically silenced in immune and liver tissues. Decitabine, a DNA methyltransferase inhibitor, can reactivate TUSC3 expression.

This single-arm, open-label, single-center study will enroll six male participants aged 1 month to 18 years with genetically confirmed MAGT1 mutation and a clinically diagnosis of XMEN disease. Eligible participants will receive decitabine intravenously at 20 mg/m² once daily for five consecutive days every four weeks, for a total of four cycles. Safety and efficacy will be evaluated by monitoring NKG2D expression, liver enzymes levels, EBV viral load, lymphocyte function, TUSC3 expression, and adverse events. Participants will be followed for 180 days after the last dose.

Who can participate

Healthy volunteers accepted: No

Only the study team can determine whether someone qualifies for participation.

Inclusion criteria

  • Male participants aged 1 month to 18 years old.
  • Confirmed MAGT1 gene mutation by genetic testing.
  • Clinical manifestations consistent with XMEN disease, including liver dysfunction and/or EBV infection.
  • Reduced lymphocyte NKG2D expression.
  • Vital signs within normal range at screening.
  • Expected survival ≥ 6 months.
  • Able to comply with study procedures.
  • Guardian and participant provide written informed consent.

Exclusion criteria

  • Hypersensitivity to decitabine or any excipient.
  • Hematopoietic stem cell transplantation within 1 year before enrollment.
  • Severe concurrent organ dysfunction or systemic disease.
  • Positive HBsAg, anti-HCV, syphilis, or HIV test.
  • Neurological or psychiatric disorders that impair compliance.
  • Participation in another clinical trial within 3 months.
  • Other conditions judged inappropriate by the investigator.

Treatment and study plan

decitabine

Drug

Decitabine 20 mg/m² intravenous infusion once daily for 5 consecutive days every 4 weeks, for a total of 4 cycles.

Primary outcomes

  1. Improvement magnitude of serum liver enzyme levels

    Time frame: up to 6 months after the last dose

    Analyze serum alanine aminotransferase (ALT), aspartate aminotransferase (AST), and γ-glutamyl transferase (γ-GT) levels at key time points (before the second dose, before the fourth dose, 3 months after the last dose, and 6 months after the last dose) calculate the reduction magnitude from baseline ([(baseline value-target time point value) / baseline value] × 100%) at each time point, and evaluate the trend of liver function recovery.

  2. Changes in NKG2D expression levels

    Time frame: up to 6 months after the last dose

    Changes in NKG2D expression levels of peripheral blood lymphocytes from baseline; the expression levels were analyzed before the second administration, before the fourth administration, and 3 months after the last administration, and the absolute change values from baseline were calculated for each time point.

  3. Cumulative incidence of grade ≥3 myelosuppression

    Time frame: up to 6-month follow-up period after the last dose

    Classified according to the Common Terminology Criteria for Adverse Events (CTCAE) version 5.0, with observation periods covering the entire treatment duration (4 dosing cycles) and a 6-month follow-up period after the last dose. Criteria for determination: White blood cell count (WBC) <1.0×10^9/L or platelet count (PLT) <25×10^9/L in complete blood count (CBC). The proportion of patients meeting the above criteria was statistically analyzed.

Secondary outcomes

  1. Changes in TUSC3 expression in peripheral blood lymphocytes

    Time frame: up to 6-month after the last dose

    Quantitative analysis of relative mRNA expression levels (using real-time fluorescent quantitative PCR) and protein expression levels (using Western blot) was performed to describe the upregulation/downregulation trends and relative change magnitudes at each key node (corresponding to primary endpoints) compared to baseline.

  2. Increase in cytotoxic activity of NK cells/T cells

    Time frame: up to 6 months after the last dose

    Cytotoxic function assays were used to detect cytotoxic activity (expressed as kill rate%), and the absolute increase values (target time point kill rate-baseline kill rate) at each key node (same as primary endpoint) were calculated compared to baseline.

  3. Cumulative incidence of coagulation dysfunction

    Time frame: up to 6 months after the last dose

    Prolonged prothrombin time (PT)> 3 seconds, prolonged activated partial thromboplastin time (APTT)> 10 seconds, or international normalized ratio (INR)> 1.5 in coagulation function tests. The proportion of patients meeting any one of these criteria was statistically analyzed at each key node (corresponding to primary endpoints).

  4. Overall incidence rate of adverse events and severity grading

    Time frame: up to 6 months after the last dose

    The occurrence time, duration, severity (graded according to CTCAE version 5.0), and association with the study drug (definitively related, possibly related, or unrelated) of AE were recorded. The overall incidence rate and the composition ratio of AE at each severity level were statistically analyzed.

Other outcomes

  1. Occurrence of infection events

    Time frame: up to 6 months after the last dose

    Infections are classified according to etiological detection results (EBV infection, bacterial infection, other infections), and the frequency, severity, and treatment outcomes of each type of infection are recorded.

  2. Malignant tumor occurrence

    Time frame: up to 6 months after the last dose

    The diagnosis time, pathological type, and clinical stage of newly developed malignant tumors will be recorded.

Study contacts

Contact information is provided by the study sponsor or research team.

Jia Hou, Ph.D., M.D.

CONTACT

[email protected]

86-21-64933338

Wenjie Wang, M.D.

CONTACT

[email protected]

86-21-64931085

Sponsors and collaborators

Lead sponsor

Children's Hospital of Fudan University

Other

Collaborators

  • National Natural Science Foundation of China

Registry information

Official study title

Single-arm Clinical Study Evaluating the Safety and Efficacy of Decitabine in the Treatment of X-linked MAGT1 Deficiency With Increased Susceptibility to EBV Infection and N-linked Glycosylation Defect (XMEN) Patients

Important dates

Study start
2026
Primary completion
2028
Study completion
2028
First posted
Apr 29, 2026
Registry last updated
Apr 29, 2026

OpenTrials presents study information sourced from ClinicalTrials.gov. The official registry record should be consulted for the latest information.

View the official ClinicalTrials.gov record (opens in a new tab)

This listing is for discovery and informational purposes only. It is not medical advice, does not guarantee that a study is recruiting, and does not determine eligibility. Contact the study team and a qualified healthcare professional when considering participation.