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NCT Number: NCT07319949

Evaluating the Predictive Capability of Transcriptomic Profiling for Identifying the Primary Site of Metastatic Tumors

This study will enroll patients with metastatic malignancies. Tumor samples (fresh or formalin-fixed paraffin-embedded tissue specimens) will undergo RNA extraction and next-generation sequencing (RNA-seq). Once the raw data is obtained, the system will analyze the transcriptomic feature values (cancer-specific RNA transcripts and tissue-specific RNA transcripts) expressed in the tumor tissue samples to further predict tissue origin using a machine learning model. The output includes probabilities and confidence intervals for tissue origin.

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Key information

Sex eligibility

All sexes

Study type

Observational

About this study

This is a non-interventional, observational study. Through a single-center, prospective clinical trial, the study aims to utilize the transcriptomic profiling for tumor tissue origin identification to predict the tissue origin of primary sites in metastatic tumors and evaluate the accuracy and specificity of this prediction solution.

Primary Endpoint:

The accuracy of the transcriptomic profiling for tumor tissue origin identification in predicting the primary site of metastatic tumors (expressed as overall accuracy with its 95% confidence interval).

Secondary Endpoints:

  • The specificity and sensitivity of the transcriptomic profiling for tumor tissue origin identification in predicting the primary site of metastatic tumors.
  • Exploratory analysis of characteristic molecular markers expressed in metastatic lesions from different primary sites.

Who can participate

Healthy volunteers accepted: No

Only the study team can determine whether someone qualifies for participation.

Inclusion criteria

  • Clinically confirmed diagnosis of malignant tumor with metastasis;
  • Metastatic lesions confirmed as malignant by histopathology;
  • Sufficient surgical resection or biopsy specimens retained to meet the requirements for next-generation sequencing;
  • The participant (or their legal representative/guardian) has signed the informed consent form, confirming full understanding of the study's purpose and procedures, and voluntarily agrees to participate.

Exclusion criteria

  • The investigator deems the patient unable to provide informed consent.

Treatment and study plan

Primary outcomes

  1. The accuracy of the transcriptomic profiling for tumor tissue origin identification in predicting the primary site of metastatic tumors

    Time frame: through study completion, an average of 1 year

    Overall accuracy of the tumor tissue origin tracing transcriptome test for predicting the primary site of metastatic tumors (number of correct predictions/total evaluable cases); Specificity [true negatives/(true negatives + false positives)]; Sensitivity [true positives/(true positives + false negatives)].

Study contacts

Contact information is provided by the study sponsor or research team.

Zhiao Chen, Ph.D.

CONTACT

[email protected]

008618017312074

Sponsors and collaborators

Lead sponsor

Fudan University

Other

Registry information

Official study title

Evaluative Study on Predicting the Primary Site of Metastatic Tumors Using Transcriptomic Profiling for Tumor Tissue Origin Identification

Important dates

Study start
2026
Primary completion
2026
Study completion
2026
First posted
Jan 6, 2026
Registry last updated
Jan 6, 2026

OpenTrials presents study information sourced from ClinicalTrials.gov. The official registry record should be consulted for the latest information.

View the official ClinicalTrials.gov record (opens in a new tab)

This listing is for discovery and informational purposes only. It is not medical advice, does not guarantee that a study is recruiting, and does not determine eligibility. Contact the study team and a qualified healthcare professional when considering participation.

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